Studies and trait types available in Genoscores

The database contains 1153910 phenotypes grouped into the following trait types:

Trait type : number of traits per trait type
blood cell: 15  
clinical: 40  
glycan: 157  
IgG glycan: 101  
immune cell: 423  
lipid: 4  
metabolite: 453  
methylation: 246126  
protein: 3078  
splicing: 146435  
transcript: 757043  
transferrin glycan: 35  

The database contains 47 studies:

# Study Consortium N samples Ancestry Trait type Tissue
1 Rheumatoid arthritis meta-analysis (Okada 2014) 80799 EUR EUR,EAS clinical
2 Inflammatory bowel disease genetics (Liu 2015) 65308 EUR,ASN,SAS clinical
3 eQTL meta-analysis (Westra 2013) 5311 EUR transcript peripheral blood
4 Type 1 diabetes meta-analysis (Barrett 2009) 16559 EUR clinical
5 Multiple sclerosis Genetics Consortium Immunochip (Beecham 2013) IMSGC 38589 EUR clinical
6 Juvenile idiopathic arthritis Immunochip (Hinks 2013) 15872 EUR clinical
7 Celiac disease Immunochip (Trynka 2011) 24269 EUR clinical
8 Psoriasis Immunochip (Tsoi 2012) 33394 EUR clinical
9 Sarcoidosis trans-ethnic (Adrianto 2012) 5644 EUR,AFA clinical
10 Type 1 diabetes meta-analysis (Onengut-Gumuscu 2015) 23109 EUR clinical
11 Glucose and insulin responses to glucose challenge (Saxena 2010) MAGIC 15234 EUR clinical blood
12 Glucose and insulin results accounting for BMI (Manning 2012) MAGIC 58070 EUR clinical blood
13 Change in fasting glucose over time (Liu 2019) MAGIC 13807 EUR clinical whole blood
14 Fasting insulin and fasting glucose meta-analysis (Dupuis 2010) MAGIC 46186 EUR clinical blood plasma and others
15 Fasting proinsulin (Strawbridge 2011) MAGIC 10701 EUR clinical whole blood
16 Genetic determinants of HbA1c diverse populations (Wheeler 2017) MAGIC 123665 AFA EAS EUR SAS clinical blood
17 Glucose-stimulated insulin secretion indices (Prokopenko 2014) MAGIC 5318 EUR clinical plasma blood
18 Modified Stumvoll ISI (Walford 2016) MAGIC 16753 EUR clinical plasma blood
19 Glycemic traits Metabochip (Scott 2012) MAGIC 133010 EUR clinical plasma blood
20 Serum urate and gout meta-analyses (Köttgen 2013) Global Urate Genetics Consortium 110347 EUR clinical
21 GWAS of circulating cytokines and growth factors (Ahola-Olli 2017) 8293 EUR protein blood plasma/serum
22 Global lipids genetics consortium (Willer 2013) Global lipids genetics consortium 95358 EUR,AFR,EAS,SAS lipid blood
23 GTEx atlas of genetic regulatory effects v8 (Aguet 2019) GTEx 706 EUR,AFA,ASN,OTR transcript splicing 48 various tissues
24 Retina eQTL analysis (Ratnapriya 2019) GTEx 406 EUR,AFA,ASN,OTR transcript retina
25 GWAS of creatinine in Icelanders (Sveinbjornsson 2014) 194286 EUR clinical blood serum
26 Somalogic plasma proteins (Sun 2018) 3301 EUR protein blood plasma
27 Gene expressions in blood and adipose tissue (Gusev 2016) 1264 EUR transcript adipose and others
28 Systemic lupus erythematosus meta-analysis (Bentham 2015) 14267 EUR clinical
29 Total plasma N-glycans (Huffman 2011) 3268 EUR glycan blood plasma
30 IgG N-glycosylation traits (Klaric 2019) 8090 EUR IgG glycan blood plasma
31 OLINK plasma protein biomarkers (Folkersen 2017) IMPROVE 3394 EUR protein blood plasma
32 Meta-analysis of atopic dermatitis in Europeans (Paternoster 2015) EAGLE 103066 EUR clinical
33 Primary sclerosing cholangitis (Ji 2016) 14890 EUR clinical
34 Immune cell counts Sardinian study (Orrù 2013) SardiNIA 1629 EUR immune cell blood
35 Immune cells female twins (Roederer 2015) TwinsUK 497 EUR immune cell blood
36 eQTLGen meta-analysis (Vosa 2021) eQTLGen 26490 EUR transcript whole blood and PBMC
37 Human blood metabolites (Shin 2014) 7824 EUR metabolite blood
39 Immune cells DICE (Schmiedel 2018) DICE 91 EUR,AFA,ASN,OTR transcript 15 various tissues
40

Type 1 diabetes immunochip (Robertson 2020)

53831 EUR,AFA,LEN clinical
41 GTEx atlas of genetic regulatory effects v8 Europeans only (Aguet 2019) GTEx 706 EUR transcript splicing 48 various tissues
42

GoDMC methylation meta-analysis

GoDMC 23577 EUR methylation blood
43 GWAS of inflammatory proteins in the Lothian Birth Cohort (Hillary 2020) LBC 982 EUR protein blood plasma
44 Human blood plasma N-glycome (Sharapov 2019) 2763 EUR glycan blood plasma
45 Colorectal cancer risk (Li 2020) 43199 EUR clinical
46 Kawasaki disease discovery (Hoggart 2021) 8456 EUR clinical
47 Immune cells eqtls (Chen 2016) BLUEPRINT NIHR 194 EUR transcript monocytes and others
48 Human blood cell traits (Chen 2020) BCX 719911 AFR EAS EUR EUR,EAS,AFR,LEN LEN blood cell blood